BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029F06LP1|AL429087
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1722 1705 0.0
>3x_Contig1722
Length = 17718
Score = 1705 bits (860), Expect = 0.0
Identities = 893/906 (98%), Gaps = 10/906 (1%)
Strand = Plus / Minus
Query: 1 gatctgctgatatcttgctatcgtgcatataatcacatattttcggaagtgatacttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17606 gatctgctgatatcttgctatcgtgcatataatcacatattttcggaagtgatacttttg 17547
Query: 61 acaacacttgctcaaacttggtgaagttgaccggttgaagaacgaaatttaagcttgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17546 acaacacttgctcaaacttggtgaagttgaccggttgaagaacgaaatttaagcttgata 17487
Query: 121 tagttttgatgcatatagtaccgatctgaaagtttttgttggtatatgaaaatacaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17486 tagttttgatgcatatagtaccgatctgaaagtttttgttggtatatgaaaatacaggca 17427
Query: 181 atcttgtttctttattaagattaggatcatttatcatttcttgtgttatttgaatttcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17426 atcttgtttctttattaagattaggatcatttatcatttcttgtgttatttgaatttcac 17367
Query: 241 caataattgaatctttattggagtatgaattatcctccacggagcatttaataattatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17366 caataattgaatctttattggagtatgaattatcctccacggagcatttaataattatct 17307
Query: 301 ttattatgtttgtccttacgctaaaattgaaattaaattcctctctccagaacggagacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17306 ttattatgtttgtccttacgctaaaattgaaattaaattcctctctccagaacggagacg 17247
Query: 361 tagaggatggaacaacggctgtcctcgccacagctttatcccagaggtttatttcagcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17246 tagaggatggaacaacggctgtcctcgccacagctttatcccagaggtttatttcagcgt 17187
Query: 421 atagacgtggcttttcaatctccaaatctctcaagtccgcttctaagatcgatattttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17186 atagacgtggcttttcaatctccaaatctctcaagtccgcttctaagatcgatattttga 17127
Query: 481 atctattggagattcgaagttcattagacttatccgtgcctattaaactcagaacatcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17126 atctattggagattcgaagttcattagacttatccgtgcctattaaactcagaacatcag 17067
Query: 541 gcattgcaaatgagttaagagcaacaaaccagtcttccaaatcgattcgcaatggcaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17066 gcattgcaaatgagttaagagcaacaaaccagtcttccaaatcgattcgcaatggcaacc 17007
Query: 601 tcaaatataagtattgtgatagtttcctgcttttagttgatgagcgagaattgtcagcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17006 tcaaatataagtattgtgatagtttcctgcttttagttgatgagcgagaattgtcagcga 16947
Query: 661 agagnctctcattagaagaaatttgcaattgtttgcggagttgcggaaggatacccataa 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16946 agcagctctcattagaagaaatttgcaattgtttgcggagttgcggaaggatacccataa 16887
Query: 721 agaggtatttgtcggattgaaagatggatgagtccacaatatgaatttccgagcgcaaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16886 agaggtatttgtcggattgaaagatggatgagtccacaatatgaatttccgagcgcaaga 16827
Query: 781 attttgtcacatcaatagaatagattagggatccatcgctctgaatcaacaaatctagga 840
|||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16826 attt----------atagaatagattagggatccatcgctctgaatcaacaaatctagga 16777
Query: 841 taccatccgtctttaagacacccatcgcagcaaaccagccatagtcatctgactccccat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16776 taccatccgtctttaagacacccatcgcagcaaaccagccatagtcatctgactccccat 16717
Query: 901 tggaag 906
||||||
Sbjct: 16716 tggaag 16711
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6965
Number of Sequences: 1807
Number of extensions: 6965
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)